Article(id=1277255491906572507, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1277255461552390652, articleNumber=null, orderNo=null, doi=10.3969/j.issn.1000-2561.2026.03.015, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1760284800000, receivedDateStr=2025-10-13, revisedDate=null, revisedDateStr=null, acceptedDate=1766160000000, acceptedDateStr=2025-12-20, onlineDate=1782451039529, onlineDateStr=2026-06-26, pubDate=1774368000000, pubDateStr=2026-03-25, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1782451039529, onlineIssueDateStr=2026-06-26, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1782451039529, creator=13701087609, updateTime=1782451039529, updator=13701087609, issue=Issue{id=1277255461552390652, tenantId=1146029695717560320, journalId=1235980609244409860, year='2026', volume='47', issue='3', pageStart='553', pageEnd='823', issueExtLink='null', onlineDate='null', pubDate='1774368000000', pubDateStr='2026-03-25', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=1, specialIssue=null, createTime=1782451032293, creator='13701087609', updateTime=1782451557265, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1277257664249852732, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1277255461552390652, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1277257664249852733, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1277255461552390652, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=702, endPage=716, ext={EN=ArticleExt(id=1277255492221145309, articleId=1277255491906572507, tenantId=1146029695717560320, journalId=1235980609244409860, language=EN, title=Analysis of Microbiome Characteristics in Rhizosphere Soil of Continuous Cropping Pepper with Varying Incidence of Fusarium Wilt, columnId=1236292524264968282, journalTitle=Chinese Journal of Tropical Crops, columnName=Plant Protection & Bio-safety, runingTitle=null, highlight=null, articleAbstract=

Elucidating the response of rhizosphere soil microorganisms to the invasion of Fusarium in pepper provides a theoretical foundation and technical support for research on pepper rhizosphere microecology, the exploration of superior biocontrol resources, and the targeted control of pepper Fusarium wilt. Rhizosphere soil samples were collected from healthy (CK), mildly diseased (T1), moderately diseased (T2) and severely diseased (T3) pepper plants. High-throughput sequencing and bioinformatics analyses were employed to compare the community structure and diversity of rhizosphere microorganisms and to assess the functional differences. CK had the highest number of unique bacterial OTUs, while T1 had the highest number of unique fungal OTUs. At the genus level, the dominant bacterial genera included unclassified Acidobacteriaceaeunclassified Bacteriaunclassified RhodospirillalesGaiellaunclassified BetaproteobacteriaTerrimonasunclassified Desulfuromonadia and Fontisphaera the dominant fungal genera included Thermoascus, Mortierella, Apiotrichum, Fusarium, Rasamsonia, unclassified Fungi, Paracremonium, Talaromyces, Debaryomyces and Metarhizium. With increasing disease severity, the richness of both bacteria and fungi initially increased and then decreased, while the diversity showed a trend of initial increase, followed by a decrease, and then a subsequent increase. PCoA results revealed distinct differences in bacterial and fungal communities among the treatments. Linear discriminant analysis (LEfSe) identified 14, 2, 6 and 6 bacteria-specific species at the genus level, respectively, and 12, 10, 7 and 9 fungi-specific species for CK, T1, T2 and T3, respectively. Cross-domain correlation analysis between rhizosphere bacteria and fungi demonstrated that Fusarium was negatively correlated with Acidibacter, Bradyrhizobium and Bryobacter. As disease severity increased, the network parameters of bacterial and fungal community interactions exhibited an initial rise, followed by a decline, and then a subsequent rise. The abundance of potentially pathogenic microorganisms was significantly higher in diseased plants than that in healthy peppers, while the abundance of stress-tolerant microorganisms initially increased significantly and then decreased. The relative abundance of saprotrophs was significantly higher in severely diseased plants compared to healthy peppers, and the abundance of plant pathogens showed a significant increase-decrease-increase trend. Pepper Fusarium wilt significantly altered the characteristics of the rhizosphere soil microbiome. In the early stages of disease, pepper roots likely resist Fusarium infection by recruiting beneficial microorganisms, stimulating bacterial stress tolerance, and enhancing fungal saprotrophic and symbiotic functions. In the middle and late stages, intensified root damage leads to a decline in recruitment capacity, allowing pathogens to dominate and beneficial microbial communities to be suppressed.

, authors=null, authorsList=Jun WANG, You ZHOU, Changcong LIANG, Lijia GUO, Yang YANG, Junsheng HUANG, Can WANG, Laying YANG, Yongquan TA, authorCompany=null, correspAuthors=Laying YANG, Yongquan TA, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1277255492502163679, articleId=1277255491906572507, tenantId=1146029695717560320, journalId=1235980609244409860, language=CN, title=连作胡椒枯萎病不同发病率根际土壤微生物组特征分析研究, columnId=1236292524520820846, journalTitle=热带作物学报, columnName=植物保护与生物安全, runingTitle=null, highlight=null, articleAbstract=

为了明确根际土壤微生物对胡椒枯萎病菌入侵的响应,为胡椒根际土壤微生态的研究、优异生防资源的挖掘及胡椒枯萎病的靶向防控提供理论依据和技术支持,本研究分别采集健康(CK)、轻度发病(T1)、中度发病(T2)及重度发病(T3)的胡椒根际土壤,通过高通量测序技术分析细菌和真菌的群落结构、多样性和功能差异。结果表明:CK的特有细菌OTUs数、T1的特有真菌OTUs数均最多;在属分类水平上,优势细菌属包括unclassified Acidobacteriaceaeunclassified Bacteriaunclassified RhodospirillalesGaiellaunclassified BetaproteobacteriaTerrimonasunclassified DesulfuromonadiaFontisphaera;优势真菌属包括ThermoascusMortierellaApiotrichumFusariumRasamsoniaunclassified FungiParacremoniumRasamsoniaTalaromycesDebaryomycesMetarhizium;随发病程度增加,细菌和真菌丰富度均呈上升-下降趋势,多样性均呈上升-下降-上升趋势;PCoA结果显示,各处理的细菌和真菌群落差异明显;线性判别分析(LEfSe)显示,在属水平上,CK、T1、T2和T3的细菌特有物种分别为14种、2种、6种和6种,真菌特有物种分别为12种、10种、7种和9种;对根际细菌和真菌进行跨域相互关联分析表明,FusariumAcidibacterBradyrhizobiumBryobacter呈负相关;随着发病程度增加,细菌和真菌群落互作的网络参数呈上升-下降-上升趋势;不同发病程度的potentially pathogenic功能类群丰度均显著高于健康胡椒,stress tolerant功能类群丰度呈显著上升-下降趋势;重度发病的saprotroph功能类群丰度极显著高于健康胡椒,plant pathogen功能类群丰度呈显著上升-下降-上升趋势。胡椒枯萎病显著改变了根际土壤微生物特征。在发病初期,胡椒根系可能通过招募有益微生物,并激发细菌压力耐受、真菌腐生营养型和共生营养型等功能来抵御Fusarium侵染;中后期根系受损加剧,招募能力衰退,病原菌逐渐占据主导地位,有益菌群被抑制。

, authors=

* 周游(1983—),男,博士,助理研究员,研究方向:植物病害生物防治。

汪军(1981—),男,博士,助理研究员,研究方向:根际微生态与土传病害;

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** 杨腊英(YANG Laying),E-mail:
他永全(TA Yongquan),E-mail:
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汪军(1981—),男,博士,助理研究员,研究方向:根际微生态与土传病害;

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连作胡椒枯萎病不同发病率根际土壤微生物组特征分析研究
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汪军 1 , 周游 1 , 梁昌聪 1 , 郭立佳 1 , 杨扬 1 , 黄俊生 1 , 王灿 2 , 杨腊英 1, **, ** , 他永全 1, **, **
热带作物学报 | 植物保护与生物安全 2026,47(3): 702-716
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热带作物学报 |植物保护与生物安全 2026 , 47 (3) : 702 -716
连作胡椒枯萎病不同发病率根际土壤微生物组特征分析研究
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prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=1, **, **, address=1.中国热带农业科学院环境与植物保护研究所/热带作物生物育种全国重点实验室/农业农村部热带作物有害生物综合治理重点实验室/国家肥料微生物种质资源库(海南)/海南省热带农业微生物菌种资源库,海南海口 571101, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=[AuthorCompany(id=1277255492841902305, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1277255491906572507, xref=1., ext=[AuthorCompanyExt(id=1277255492850290914, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1277255491906572507, companyId=1277255492841902305, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=1.Environment and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences/National Key Laboratory for Tropical Crop Breeding/Key Laboratory of Integrated Pest Management on Tropical Crops, Ministry of Agriculture and Rural Affairs/National 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汪军1, 周游1, 梁昌聪1, 郭立佳1, 杨扬1, 黄俊生1, 王灿2, 杨腊英1, **, ** , 他永全1, **, **
作者信息
  • 1.中国热带农业科学院环境与植物保护研究所/热带作物生物育种全国重点实验室/农业农村部热带作物有害生物综合治理重点实验室/国家肥料微生物种质资源库(海南)/海南省热带农业微生物菌种资源库,海南海口 571101
  • 2.中国热带农业科学院香料饮料研究所,海南万宁 571533
通讯作者:
** 杨腊英(YANG Laying),E-mail:
他永全(TA Yongquan),E-mail:
Analysis of Microbiome Characteristics in Rhizosphere Soil of Continuous Cropping Pepper with Varying Incidence of Fusarium Wilt
Jun WANG1, You ZHOU1, Changcong LIANG1, Lijia GUO1, Yang YANG1, Junsheng HUANG1, Can WANG2, Laying YANG1 , Yongquan TA1
Affiliations
  • 1.Environment and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences/National Key Laboratory for Tropical Crop Breeding/Key Laboratory of Integrated Pest Management on Tropical Crops, Ministry of Agriculture and Rural Affairs/National Collection of Microbial Resource for Fertilizer (Hainan)/Collection of Tropical Agricultural Microbial Resource in Hainan Province, Haikou, Hainan 571101, China
  • 2.Spice and Beverage Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wanning, Hainan 571533, China
出版时间: 2026-03-25 doi: 10.3969/j.issn.1000-2561.2026.03.015
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为了明确根际土壤微生物对胡椒枯萎病菌入侵的响应,为胡椒根际土壤微生态的研究、优异生防资源的挖掘及胡椒枯萎病的靶向防控提供理论依据和技术支持,本研究分别采集健康(CK)、轻度发病(T1)、中度发病(T2)及重度发病(T3)的胡椒根际土壤,通过高通量测序技术分析细菌和真菌的群落结构、多样性和功能差异。结果表明:CK的特有细菌OTUs数、T1的特有真菌OTUs数均最多;在属分类水平上,优势细菌属包括unclassified Acidobacteriaceaeunclassified Bacteriaunclassified RhodospirillalesGaiellaunclassified BetaproteobacteriaTerrimonasunclassified DesulfuromonadiaFontisphaera;优势真菌属包括ThermoascusMortierellaApiotrichumFusariumRasamsoniaunclassified FungiParacremoniumRasamsoniaTalaromycesDebaryomycesMetarhizium;随发病程度增加,细菌和真菌丰富度均呈上升-下降趋势,多样性均呈上升-下降-上升趋势;PCoA结果显示,各处理的细菌和真菌群落差异明显;线性判别分析(LEfSe)显示,在属水平上,CK、T1、T2和T3的细菌特有物种分别为14种、2种、6种和6种,真菌特有物种分别为12种、10种、7种和9种;对根际细菌和真菌进行跨域相互关联分析表明,FusariumAcidibacterBradyrhizobiumBryobacter呈负相关;随着发病程度增加,细菌和真菌群落互作的网络参数呈上升-下降-上升趋势;不同发病程度的potentially pathogenic功能类群丰度均显著高于健康胡椒,stress tolerant功能类群丰度呈显著上升-下降趋势;重度发病的saprotroph功能类群丰度极显著高于健康胡椒,plant pathogen功能类群丰度呈显著上升-下降-上升趋势。胡椒枯萎病显著改变了根际土壤微生物特征。在发病初期,胡椒根系可能通过招募有益微生物,并激发细菌压力耐受、真菌腐生营养型和共生营养型等功能来抵御Fusarium侵染;中后期根系受损加剧,招募能力衰退,病原菌逐渐占据主导地位,有益菌群被抑制。

连作胡椒  /  枯萎病  /  根际土壤微生物  /  群落结构  /  多样性

Elucidating the response of rhizosphere soil microorganisms to the invasion of Fusarium in pepper provides a theoretical foundation and technical support for research on pepper rhizosphere microecology, the exploration of superior biocontrol resources, and the targeted control of pepper Fusarium wilt. Rhizosphere soil samples were collected from healthy (CK), mildly diseased (T1), moderately diseased (T2) and severely diseased (T3) pepper plants. High-throughput sequencing and bioinformatics analyses were employed to compare the community structure and diversity of rhizosphere microorganisms and to assess the functional differences. CK had the highest number of unique bacterial OTUs, while T1 had the highest number of unique fungal OTUs. At the genus level, the dominant bacterial genera included unclassified Acidobacteriaceaeunclassified Bacteriaunclassified RhodospirillalesGaiellaunclassified BetaproteobacteriaTerrimonasunclassified Desulfuromonadia and Fontisphaera the dominant fungal genera included Thermoascus, Mortierella, Apiotrichum, Fusarium, Rasamsonia, unclassified Fungi, Paracremonium, Talaromyces, Debaryomyces and Metarhizium. With increasing disease severity, the richness of both bacteria and fungi initially increased and then decreased, while the diversity showed a trend of initial increase, followed by a decrease, and then a subsequent increase. PCoA results revealed distinct differences in bacterial and fungal communities among the treatments. Linear discriminant analysis (LEfSe) identified 14, 2, 6 and 6 bacteria-specific species at the genus level, respectively, and 12, 10, 7 and 9 fungi-specific species for CK, T1, T2 and T3, respectively. Cross-domain correlation analysis between rhizosphere bacteria and fungi demonstrated that Fusarium was negatively correlated with Acidibacter, Bradyrhizobium and Bryobacter. As disease severity increased, the network parameters of bacterial and fungal community interactions exhibited an initial rise, followed by a decline, and then a subsequent rise. The abundance of potentially pathogenic microorganisms was significantly higher in diseased plants than that in healthy peppers, while the abundance of stress-tolerant microorganisms initially increased significantly and then decreased. The relative abundance of saprotrophs was significantly higher in severely diseased plants compared to healthy peppers, and the abundance of plant pathogens showed a significant increase-decrease-increase trend. Pepper Fusarium wilt significantly altered the characteristics of the rhizosphere soil microbiome. In the early stages of disease, pepper roots likely resist Fusarium infection by recruiting beneficial microorganisms, stimulating bacterial stress tolerance, and enhancing fungal saprotrophic and symbiotic functions. In the middle and late stages, intensified root damage leads to a decline in recruitment capacity, allowing pathogens to dominate and beneficial microbial communities to be suppressed.

continuous pepper cropping  /  Fusarium wilt  /  rhizosphere soil microorganisms  /  community structure  /  diversity
汪军, 周游, 梁昌聪, 郭立佳, 杨扬, 黄俊生, 王灿, 杨腊英, 他永全. 连作胡椒枯萎病不同发病率根际土壤微生物组特征分析研究. 热带作物学报, 2026 , 47 (3) : 702 -716 . DOI: 10.3969/j.issn.1000-2561.2026.03.015
Jun WANG, You ZHOU, Changcong LIANG, Lijia GUO, Yang YANG, Junsheng HUANG, Can WANG, Laying YANG, Yongquan TA. Analysis of Microbiome Characteristics in Rhizosphere Soil of Continuous Cropping Pepper with Varying Incidence of Fusarium Wilt[J]. Chinese Journal of Tropical Crops, 2026 , 47 (3) : 702 -716 . DOI: 10.3969/j.issn.1000-2561.2026.03.015
  • 海南省重点研发计划项目(ZDYF2024YJGG001-25; ZDYF2024XDNY184)
  • 海南省胡椒产业技术体系项目(HNARS-09-ZJ03)
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doi: 10.3969/j.issn.1000-2561.2026.03.015
  • 接收时间:2025-10-13
  • 首发时间:2026-06-26
  • 出版时间:2026-03-25
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  • 收稿日期:2025-10-13
  • 录用日期:2025-12-20
基金
海南省重点研发计划项目(ZDYF2024YJGG001-25; ZDYF2024XDNY184)
海南省胡椒产业技术体系项目(HNARS-09-ZJ03)
作者信息
    1.中国热带农业科学院环境与植物保护研究所/热带作物生物育种全国重点实验室/农业农村部热带作物有害生物综合治理重点实验室/国家肥料微生物种质资源库(海南)/海南省热带农业微生物菌种资源库,海南海口 571101
    2.中国热带农业科学院香料饮料研究所,海南万宁 571533

通讯作者:

** 杨腊英(YANG Laying),E-mail:
他永全(TA Yongquan),E-mail:
参考文献
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https://castjournals.cast.org.cn/joweb/rdzwxb/CN/10.3969/j.issn.1000-2561.2026.03.015
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2种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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