Article(id=1276238272636518593, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1276238094940639467, articleNumber=null, orderNo=null, doi=10.3969/j.issn.1000-2561.2025.02.003, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1726070400000, receivedDateStr=2024-09-12, revisedDate=1728835200000, revisedDateStr=2024-10-14, acceptedDate=null, acceptedDateStr=null, onlineDate=1782208515557, onlineDateStr=2026-06-23, pubDate=1740412800000, pubDateStr=2025-02-25, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1782208515557, onlineIssueDateStr=2026-06-23, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1782208515557, creator=13701087609, updateTime=1782208515557, updator=13701087609, issue=Issue{id=1276238094940639467, tenantId=1146029695717560320, journalId=1235980609244409860, year='2025', volume='46', issue='2', pageStart='247', pageEnd='489', issueExtLink='null', onlineDate='null', pubDate='1740412800000', pubDateStr='2025-02-25', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1782208473191, creator='13701087609', updateTime=1782208527160, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1276238321386909890, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1276238094940639467, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1276238321386909891, tenantId=1146029695717560320, journalId=1235980609244409860, issueId=1276238094940639467, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=266, endPage=277, ext={EN=ArticleExt(id=1276238273315995843, articleId=1276238272636518593, tenantId=1146029695717560320, journalId=1235980609244409860, language=EN, title=Physiological and Transcriptome Response Analysis of
Dendrobium nobile Flowers under High Temperature Stress, columnId=1236256430337085821, journalTitle=Chinese Journal of Tropical Crops, columnName=Omics & Biotechnology, runingTitle=null, highlight=null, articleAbstract=
Dendrobium nobile has a high ornamental value and is one of the important parental plants in the hybridization group of Dendrobium. To explore the physiological and molecular mechanisms of D. nobile flowers in response to high-temperature stress, this study combined water potential, cell membrane permeability monitoring, ethylene-related compound content determination, and transcriptome analysis. Treatment groups were subjected to 36 ℃ high-temperature stress for 5 h, 10 h and 24 h, with a normal temperature culture as the control. The physiological characteristics of D. nobile flowers under 36 ℃ and the transcriptome response to high temperature were studied. The results shoed that 36 ℃ high-temperature stress had almost no effect on the water status and cell membrane permeability of D. nobile flowers within 24h. The content of ethylene precursor (ACC) in the flowers significantly increased in all three high-temperature treatment groups compared to the control (Dno-CK). The number of differentially expressed genes between the 5 h high-temperature treatment and the control group (Dno-CK vs Dno-5h), the 10 h high-temperature treatment and the control (Dno-CK vs Dno-10h), and the 24 h high-temperature treatment and the control (Dno-CK vs Dno-24h) was 25 204, 25 528 and 26 878, respectively, with the number of genes up-and downregulated was approximately 1∶1. As the duration of high-temperature stress increased, the total number of differentially expressed genes in D. nobile flowers gradually rose. KEGG enrichment analysis showed that the differential genes of the three comparison groups were enriched to the monoterpene biosynthesis pathway, indicating that high temperature promoted the synthesis of volatile terpenoids in D. nobile. Functional enrichment analysis indicated that most of the differentially ex-pressed genes in response to high-temperature stress were enriched in pathways related to genetic information processing and metabolic pathways, with the highest number of differential genes in the nucleotide excision repair, starch and sucrose metabolism, and protein processing in the endoplasmic reticulum pathways. This suggests that high temperature stimulates D. nobile flowers to enhance various metabolic activities in response to heat stress. Screening of differentially expressed genes revealed that heat shock protein (HSP) genes in D. nobile flowers were significantly up-regulated in response to high-temperature stress. The HSP genes responding to high-temperature stress within 24 h in D. nobile flowers were primarily the HSP20 genes, followed by the HSP90 genes. Further research on the heat re-sponse genes of D. nobile flowers can focus on the HSP20 and HSP90 genes. This study on the physiological and transcriptome response of D. nobile flowers to high-temperature stress would provide a reference for heat-tolerant breeding research and theoretical support for the cultivation of heat-resistant D. varieties.
, authors=null, authorsList=Hongxia MENG, Jiawei LI, Jianying GONG, Huaxin WANG, authorCompany=null, correspAuthors=Jiawei LI, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1276238276876959955, articleId=1276238272636518593, tenantId=1146029695717560320, journalId=1235980609244409860, language=CN, title=高温胁迫下金钗石斛花的生理及转录组响应分析, columnId=1236256430517440904, journalTitle=热带作物学报, columnName=组学与生物技术, runingTitle=null, highlight=null, articleAbstract=
金钗石斛具有较高的观赏价值,是春石斛杂交品种群的重要亲本之一,为探索金钗石斛花响应高温胁迫的生理和分子机制,本研究结合水势、细胞膜通透性监测、乙烯相关化合物含量测定,以及转录组学分析,以36 ℃高温胁迫5、10、24 h为处理组,常温培养为对照组,研究36 ℃下金钗石斛花的生理特性,分析其对高温的响应转录组特征。结果表明:36 ℃高温胁迫在24 h内对金钗石斛花水分状况和细胞膜通透性几乎没有影响,3个高温处理组的金钗石斛花乙烯前体(ACC)含量与对照组(Dno-CK)相比均显著增加;高温处理5 h与常温对照组(Dno-CK vs Dno-5h)、高温处理10 h与常温对照组(Dno-CK vs Dno-10h)、高温处理24 h与常温对照组(Dno-CK vs Dno-24h)3个比较组的差异基因分别为25 204、25 528、26 878个,上调表达与下调表达的基因量约为1∶1,随着高温胁迫时间的延长,金钗石斛花的差异表达的基因总数逐渐上升。KEGG富集分析结果表明,3个比较组差异基因均富集到单萜生物合成通路,说明高温促进金钗石斛花挥发性萜类化合物的合成。GO功能富集分析结果表明,金钗石斛花受高温胁迫大部分差异基因富集到遗传信息处理途径、代谢途径相关的通路,在核苷酸切除修复、淀粉和蔗糖代谢、内质网中的蛋白质加工3条通路中差异基因数量最多,说明高温激发金钗石斛花提高各类代谢活动响应热胁迫。对差异表达基因中热激蛋白基因(HSP)筛选发现,金钗石斛花的HSP基因大量上调表达响应高温胁迫,金钗石斛花在24 h内响应高温胁迫的HSP基因主要是HSP20基因,其次是HSP90基因。金钗石斛花的热响应基因的进一步研究可针对HSP20基因和HSP90基因。本研究结果可为石斛耐热育种研究提供参考,为耐高温春石斛品系的培育提供理论支持。
, authors=
蒙红霞(2000—),女,硕士研究生,研究方向:园林植物资源及应用。
, authorsList=蒙红霞, 李佳蔚, 龚建英, 王华新, authorCompany=null, correspAuthors=李佳蔚, authorNote=null, correspAuthorsNote=
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1, 2, address=
1.College of Forestry, Guangxi University / Guangxi Key Laboratory of Forest Ecology and Conservation, Nanning, Guangxi 530004, China
2.State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Forestry, Guangxi University, Nanning, Guangxi 530004, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null), CN=AuthorExt(id=1276238280026882278, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, authorId=1276238279603257569, language=CN, stringName=蒙红霞, firstName=null, middleName=null, lastName=null, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
1, 2, address=
1.广西大学林学院/广西森林生态与保育重点实验室,广西南宁 530004
2.广西大学林学院亚热带农业生物资源保护与利用国家重点实验室,广西南宁 530004, bio={"content":"
蒙红霞(2000—),女,硕士研究生,研究方向:园林植物资源及应用。
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蒙红霞(2000—),女,硕士研究生,研究方向:园林植物资源及应用。
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1, 2, *, address=
1.College of Forestry, Guangxi University / Guangxi Key Laboratory of Forest Ecology and Conservation, Nanning, Guangxi 530004, China
2.State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Forestry, Guangxi University, Nanning, Guangxi 530004, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null), CN=AuthorExt(id=1276238280874131692, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, authorId=1276238280127545576, language=CN, stringName=李佳蔚, firstName=null, middleName=null, lastName=null, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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1.广西大学林学院/广西森林生态与保育重点实验室,广西南宁 530004
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3.Guangxi Forestry Research Institute, Nanning, Guangxi 530002, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null), CN=AuthorExt(id=1276238281767518449, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, authorId=1276238280953823470, language=CN, stringName=龚建英, firstName=null, middleName=null, lastName=null, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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3.广西壮族自治区林业科学研究院,广西南宁 530002, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=[AuthorCompany(id=1276238277929730268, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, xref=3., ext=[AuthorCompanyExt(id=1276238277938118877, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, companyId=1276238277929730268, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
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http://kns.cnki.net/kcms/detail/46.1068.S.20240430.0955.004.html. (in Chinese), articleTitle=Transcriptome sequencing and analysis of wax gourd in response to high temperature stress, refAbstract=null)], funds=[Fund(id=1276238306601992473, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, awardId=32260259, language=CN, fundingSource=国家自然科学基金项目(32260259), fundOrder=null, country=null), Fund(id=1276238306690072858, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, awardId=2021GXNSFBA075059, language=CN, fundingSource=广西自然科学基金项目(2021GXNSFBA075059), fundOrder=null, country=null)], companyList=[AuthorCompany(id=1276238277522882773, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, xref=1., ext=[AuthorCompanyExt(id=1276238277535465686, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, companyId=1276238277522882773, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
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Pictures of D. nobile flower, figureFileSmall=RdVfquaTa/E/L6xtKwF1Dw==, figureFileBig=vK8ygTlsRmO4hh0u0U0Hjg==, tableContent=null), ArticleFig(id=1276238294342041858, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图1, caption=
金钗石斛花朵, figureFileSmall=RdVfquaTa/E/L6xtKwF1Dw==, figureFileBig=vK8ygTlsRmO4hh0u0U0Hjg==, tableContent=null), ArticleFig(id=1276238295625498883, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=EN, label=Fig. 2, caption=
Effect of high temperature stress on electric conductivity, water potential and ACC content of D. nobileDifferent lowercase letters represent significant difference (P<0.05).
, figureFileSmall=z42/0SCcafHm+jYV/nPg6Q==, figureFileBig=gS609yACAqGangcn7UI99A==, tableContent=null), ArticleFig(id=1276238296028152068, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图2, caption=
高温胁迫对金钗石斛电导率、水势、ACC含量的影响不同小写字母表示差异显著(P<0.05)。
, figureFileSmall=z42/0SCcafHm+jYV/nPg6Q==, figureFileBig=gS609yACAqGangcn7UI99A==, tableContent=null), ArticleFig(id=1276238298167247112, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=EN, label=Fig. 3, caption=
volcano plot of DEGs, figureFileSmall=rYqX7d6vFI+dSriHt0MCaw==, figureFileBig=HkSKcqV68rs/UqvVr9+srg==, tableContent=null), ArticleFig(id=1276238298972553481, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图3, caption=
差异基因火山图, figureFileSmall=rYqX7d6vFI+dSriHt0MCaw==, figureFileBig=HkSKcqV68rs/UqvVr9+srg==, tableContent=null), ArticleFig(id=1276238299408761098, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=EN, label=Fig. 4, caption=
KEGG enrichment analysis of DEGsRed boxes represent the same pathways that are significantly enriched for the three comparative combined DEGs.
, figureFileSmall=mdn9zZ1aTj9+y9JBvoF6xg==, figureFileBig=GI86fiijsnuU3XXIlTCRkQ==, tableContent=null), ArticleFig(id=1276238300134375691, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图4, caption=
差异表达基因的KEGG富集分析红色方框代表3个比较组合差异表达基因显著富集的相同通路。
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GO enrichment analysis of DEGsRed boxes represent the same pathways that are significantly enriched for the three comparative combined DEGs.
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差异基因GO富集分析红色方框代表3个比较组合差异表达基因显著富集的相同通路。
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Differentially expressed HSP gene expression trendsRed lines represent HSP20 gene and blue lines represent HSP90 gene.
, figureFileSmall=Ml0BghdTt34i7Irl7kBhSQ==, figureFileBig=FEB+wHDG8ZaURKVSY6ClAw==, tableContent=null), ArticleFig(id=1276238303552733455, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图6, caption=
差异表达的HSP基因表达量趋势红色线条代表HSP20基因,蓝色线条代表HSP90基因。
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Component analysis of volatile components and fragrance-contributing components in D. nobile, figureFileSmall=xpPkKHlYElJSo3AWtcHH9w==, figureFileBig=WcBv5E5mrwr4sAyXcBZtvw==, tableContent=null), ArticleFig(id=1276238304760693012, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=图7, caption=
金钗石斛挥发性成分和萜类化合物成分分析, figureFileSmall=xpPkKHlYElJSo3AWtcHH9w==, figureFileBig=WcBv5E5mrwr4sAyXcBZtvw==, tableContent=null), ArticleFig(id=1276238306283225367, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=EN, label=Tab. 1, caption=
Assessment of sample sequencing quality
, figureFileSmall=null, figureFileBig=null, tableContent=
| 样品Sample | 原始数据Raw reads | 过滤后数据Clean reads | 过滤后碱基数Clean bases/Gb | 有效数据所占比例Proportion of valid data/% | 碱基质量值Quality score | GC含量GC content/% |
|---|
| Q20/% | Q30/% |
|---|
| Dno-CK-1 | 65 696 084 | 64 469 388 | 9.67 | 98.13 | 98.97 | 96.59 | 45.43 |
| Dno-CK-2 | 52 952 656 | 52 193 220 | 7.83 | 98.57 | 98.94 | 96.47 | 45.43 |
| Dno-CK-3 | 59 579 406 | 58 949 056 | 8.84 | 98.94 | 99.00 | 96.71 | 45.39 |
| Dno-5h-1 | 49 056 256 | 48 242 344 | 7.24 | 98.34 | 98.70 | 95.75 | 45.54 |
| Dno-5h-2 | 58 509 172 | 57 496 804 | 8.62 | 98.27 | 98.90 | 96.35 | 45.25 |
| Dno-5h-3 | 57 492 480 | 56 531 582 | 8.48 | 98.33 | 98.85 | 96.22 | 45.55 |
| Dno-10h-1 | 56 895 420 | 55 764 230 | 8.36 | 98.01 | 98.95 | 96.55 | 45.60 |
| Dno-10h-2 | 55 267 398 | 54 371 444 | 8.16 | 98.38 | 98.85 | 96.20 | 45.56 |
| Dno-10h-3 | 60 938 120 | 60 166 866 | 9.03 | 98.73 | 98.91 | 96.41 | 45.60 |
| Dno-24h-1 | 55 658 000 | 55 102 310 | 8.27 | 99.00 | 98.78 | 95.98 | 45.34 |
| Dno-24h-2 | 52 981 284 | 52 171 326 | 7.83 | 98.47 | 98.95 | 96.53 | 45.08 |
| Dno-24h-3 | 66 629 706 | 65 602 462 | 9.84 | 98.46 | 98.92 | 96.45 | 45.52 |
), ArticleFig(id=1276238306492940568, tenantId=1146029695717560320, journalId=1235980609244409860, articleId=1276238272636518593, language=CN, label=表1, caption=
样品测序质量评估
, figureFileSmall=null, figureFileBig=null, tableContent=
| 样品Sample | 原始数据Raw reads | 过滤后数据Clean reads | 过滤后碱基数Clean bases/Gb | 有效数据所占比例Proportion of valid data/% | 碱基质量值Quality score | GC含量GC content/% |
|---|
| Q20/% | Q30/% |
|---|
| Dno-CK-1 | 65 696 084 | 64 469 388 | 9.67 | 98.13 | 98.97 | 96.59 | 45.43 |
| Dno-CK-2 | 52 952 656 | 52 193 220 | 7.83 | 98.57 | 98.94 | 96.47 | 45.43 |
| Dno-CK-3 | 59 579 406 | 58 949 056 | 8.84 | 98.94 | 99.00 | 96.71 | 45.39 |
| Dno-5h-1 | 49 056 256 | 48 242 344 | 7.24 | 98.34 | 98.70 | 95.75 | 45.54 |
| Dno-5h-2 | 58 509 172 | 57 496 804 | 8.62 | 98.27 | 98.90 | 96.35 | 45.25 |
| Dno-5h-3 | 57 492 480 | 56 531 582 | 8.48 | 98.33 | 98.85 | 96.22 | 45.55 |
| Dno-10h-1 | 56 895 420 | 55 764 230 | 8.36 | 98.01 | 98.95 | 96.55 | 45.60 |
| Dno-10h-2 | 55 267 398 | 54 371 444 | 8.16 | 98.38 | 98.85 | 96.20 | 45.56 |
| Dno-10h-3 | 60 938 120 | 60 166 866 | 9.03 | 98.73 | 98.91 | 96.41 | 45.60 |
| Dno-24h-1 | 55 658 000 | 55 102 310 | 8.27 | 99.00 | 98.78 | 95.98 | 45.34 |
| Dno-24h-2 | 52 981 284 | 52 171 326 | 7.83 | 98.47 | 98.95 | 96.53 | 45.08 |
| Dno-24h-3 | 66 629 706 | 65 602 462 | 9.84 | 98.46 | 98.92 | 96.45 | 45.52 |
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