Article(id=1309569636174226067, tenantId=1146029695717560320, journalId=1308397196074385509, issueId=1309569631556301196, articleNumber=null, orderNo=null, doi=10.11733/j.issn.1007-0435.2026.02.006, pmid=null, cstr=null, oa=null, hot=0, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1754928000000, receivedDateStr=2025-08-12, revisedDate=1760889600000, revisedDateStr=2025-10-20, acceptedDate=null, acceptedDateStr=null, onlineDate=1790155331891, onlineDateStr=2026-09-23, pubDate=null, pubDateStr=null, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1790155331891, onlineIssueDateStr=2026-09-23, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1790155331891, creator=13701087609, updateTime=1790155331891, updator=13701087609, issue=Issue{id=1309569631556301196, tenantId=1146029695717560320, journalId=1308397196074385509, year='2026', volume='34', issue='2', pageStart='377', pageEnd='744', issueExtLink='null', onlineDate='null', pubDate='1771084800000', pubDateStr='2026-02-15', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1790155330790, creator='13701087609', updateTime=1790156750858, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1309575588013244561, tenantId=1146029695717560320, journalId=1308397196074385509, issueId=1309569631556301196, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1309575588017438866, tenantId=1146029695717560320, journalId=1308397196074385509, issueId=1309569631556301196, language=CN, specialIssueTitle=, coverIllustrator=, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=437, endPage=446, ext={EN=ArticleExt(id=1309569636555907733, articleId=1309569636174226067, tenantId=1146029695717560320, journalId=1308397196074385509, language=EN, title=Molecular Cloning and Gene Editing Targets Screening of CbSH4 in Carex breviculmis , columnId=null, journalTitle=Acta Agrestia Sinica, columnName=null, runingTitle=null, highlight=null, articleAbstract=Carex breviculamis is an important native species that is water-saving and drought resistant, with advantages such as long green period, shade tolerance, and high fruiting rate. However, in the actual harvesting process, the problem of seeds easily falling off limits the mechanization of seed harvesting and large-scale production applications. In order to explore the function of SH4 gene in the process of seed-shattering in C. breviculmis and further use gene editing technology to create new germplasm resistant to seed shattering, the CbSH4 gene was cloned and the gene editing target was screened. The CbSH4 encoded 319 amino acid residues, was a hydrophilic protein, and was most closely related to Carex littledalei, containing a highly conserved Myb4 DNA-binding domain, which belonged to a typical MYB transcription factor. The transient expression results of Nicotiana benthamiana showed that CbSH4 protein was localized in the nucleus and cytoplasm. The real-time fluorescence quantification results showed that the relative expression level of CbSH4 in the spike was significantly higher than that in the roots and leaves, and it was expressed in the abscission zone at different developmental stages. At the same time, in order to achieve efficient gene editing in C. breviculmis , three specific targets were designed in this study, and sgRNA1 was obtained by sgRNA transcription and screening in vitro with a cleavage efficiency of 58.3%, which could be used for subsequent gene editing of C. breviculmis . In this study, CbSH4 was successfully cloned and the preliminary functional analysis was completed, and the high-efficiency gene editing targets were screened, which provided a basis for the creation of new germplasm with low seed shattering., authors=HUANG Yang-jie1 , TENG Ke2 , FAN Xi-feng2 , YUE Yue-sen2 , ZHANG Hui2 , WEN Hai-feng2 , YIN Shu-xia1 , LIU Ling-yun2 , authorsList=HUANG Yang-jie, TENG Ke, FAN Xi-feng, YUE Yue-sen, ZHANG Hui, WEN Hai-feng, YIN Shu-xia, LIU Ling-yun, authorCompany=1 School of Grassland Science, Beijing Forestry University, Beijing 100083, China; 2 Institute of Grassland, Flowers, and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China, correspAuthors=null, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1309569636472021652, articleId=1309569636174226067, tenantId=1146029695717560320, journalId=1308397196074385509, language=CN, title=青绿苔草CbSH4 基因克隆及基因编辑靶点筛选, columnId=1309565024058835950, journalTitle=草地学报, columnName=研究论文, runingTitle=null, highlight=null, articleAbstract=青绿苔草(Carex breviculmis )是一种节水抗旱的重要乡土物种,具有绿期长、耐阴、结实率高等优点。但在实际采收过程中,种子极易落粒的问题限制了种子机械化收获和大规模生产应用。为探究SH4 基因在青绿苔草落粒过程中的功能,进一步利用基因编辑技术创制低落粒新种质,本研究克隆青绿苔草CbSH4 基因并进行基因编辑靶点筛选。结果表明,CbSH4 编码319个氨基酸残基,其编码产物是亲水性蛋白,与康藏嵩草(Carex littledalei )亲缘关系最近。CbSH4 含有1个高度保守的Myb4 DNA结合域,属于典型的MYB转录因子。烟草瞬时表达结果显示,CbSH4 定位于细胞核和细胞质。实时荧光定量结果表明,CbSH4 在穗中的相对表达量显著高于根和叶,在不同发育时期的离区中均有表达。同时,为了在青绿苔草中实现高效的基因编辑,本研究设计了3个特异性靶点,利用sgRNA体外转录和筛选,获得切割效率58.3%的sgRNA1,可用于后续青绿苔草基因编辑。本研究成功克隆了CbSH4 并完成初步功能分析,筛选出了高效基因编辑靶点,为创制低落粒的青绿苔草新种质提供了基础。, authors=黄扬洁1 , 滕珂2 , 范希峰2 , 岳跃森2 , 张辉2 , 温海峰2 , 尹淑霞1 , 刘凌云2 , authorsList=黄扬洁, 滕珂, 范希峰, 岳跃森, 张辉, 温海峰, 尹淑霞, 刘凌云, authorCompany=1 北京林业大学草业与草原学院, 北京 100083; 2 北京市农林科学院草业花卉与景观生态研究所, 北京 100097, correspAuthors=null, authorNote=黄扬洁(2001-),女,汉族,湖南永州人,硕士研究生,主要从事草坪草遗传育种研究,E-mail:Younge0712@163.com, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=4KNBerE/6JkYNILH74N99A==, pdfFileSize=3377407, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=雄安新区科技创新专项 (2022XAGG0100); 北京市农林科学院科技创新专项 (KJCX20250917,KJCX20251208); 国家自然科学基金项目 (U20A2005,32573613))}, authors=null, keywords=[Keyword(id=1309569636732068502, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=1, keyword=青绿苔草), Keyword(id=1309569638401401495, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=2, keyword=SH4 基因), Keyword(id=1309569638493676184, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=3, keyword=亚细胞定位), Keyword(id=1309569638598533785, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=4, keyword=表达分析), Keyword(id=1309569638686614170, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=5, keyword=靶点筛选), Keyword(id=1309569638778888859, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=CN, orderNo=6, keyword=落粒性), Keyword(id=1309569638887940764, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=1, keyword=Carex breviculmis ), Keyword(id=1309569638955049629, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=2, keyword=SH4 gene), Keyword(id=1309569639043130014, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=3, keyword=Subcellular localization), Keyword(id=1309569639147987615, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=4, keyword=Expression analysis), Keyword(id=1309569639265428128, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=5, keyword=Gene target screening), Keyword(id=1309569639361897121, tenantId=1146029695717560320, journalId=1308397196074385509, articleId=1309569636174226067, language=EN, orderNo=6, keyword=Seed shattering)], refs=null, funds=null, companyList=null, figs=null, attaches=null, journal=Journal(id=1308395841968504927, delFlag=0, nameCn=草地学报, nameEn=Acta Agrestia Sinica, nameHistory1=null, nameHistory2=null, issn=1007-0435, eissn=null, cn=11-3362/S, coden=null, periodic=0, language=CN, oaType=null, ccby=null, superviseOffice=null, ownerOffice=null, pubOffice=null, editorOffice=null, officeType=null, aims=null, clcCode=null, officeProv=null, officeCity=null, officeAddr=null, officeZip=null, officeEmail=null, officePhone=null, editDirector=null, officeDirector=null, officeDirectorPhone=null, officeStaffNum=null, officeEmpNum=null, coverPicUrl=gCdi9sXCX82eLR6S1d4VLg==, journalPrice=null, startedYear=null, abbrevIsoEn=Acta Agrestia Sinica, journalRemark=null, publicationField=null, createdTime=1789875477545, updatedTime=1789876241473, createdBy=18614031015, updatedBy=13701087609, firstLetterCn=C, firstLetterEn=C, subjectCode=Agriculture, subjectName=null, subjectCodeEn=Agriculture, subjectNameEn=null, picCn=gCdi9sXCX82eLR6S1d4VLg==, picEn=4dKqEDfsaGuyf+bpm/3gfw==, jcr=null, cjcr=null, exts=[JournalExt(id=1308399046192812446, language=CN, name=草地学报, nameHistory1=null, nameHistory2=null, managedBy=, sponsoredBy=, publishedBy=, editorOffice=, officeProv=null, officeCity=null, officeAddr=, officeZip=, editDirector=, officeDirector=null, officePhone=null, coverPicUrl=null, journalRemark=, submitArticleUrl=null, websiteUrl=, createdTime=1789876241491, updatedTime=1789876241491, createdBy=13701087609, updatedBy=13701087609, submissionGuidelinesUrl=, submissionAuthorUrl=https://manu40.magtech.com.cn/JournalX_cdxb/authorLogOn.action, submissionEditorUrl=https://manu40.magtech.com.cn/JournalX_cdxb/editorLogOn.action, submissionReviewUrl=https://manu40.magtech.com.cn/JournalX_cdxb/expertLogOn.action, submissionCeEditorUrl=, submissionAeEditorUrl=, option={"copyright":""}), JournalExt(id=1308399046268309919, language=EN, name=Acta Agrestia Sinica, nameHistory1=null, nameHistory2=null, managedBy=, sponsoredBy=, publishedBy=, editorOffice=, officeProv=null, officeCity=null, officeAddr=, officeZip=, editDirector=, officeDirector=null, officePhone=null, coverPicUrl=null, journalRemark=, submitArticleUrl=null, websiteUrl=, createdTime=1789876241509, updatedTime=1789876241509, createdBy=13701087609, updatedBy=13701087609, submissionGuidelinesUrl=, submissionAuthorUrl=https://manu40.magtech.com.cn/JournalX_cdxb/authorLogOn.action, submissionEditorUrl=https://manu40.magtech.com.cn/JournalX_cdxb/editorLogOn.action, submissionReviewUrl=https://manu40.magtech.com.cn/JournalX_cdxb/expertLogOn.action, submissionCeEditorUrl=, submissionAeEditorUrl=, option={"copyright":""})], databaseList=null, tenantJournalId=1308397196074385509, websiteList=[Website(id=1308429426430071695, webName=null, webTitle=null, webDomain=null, webCopyrigh=null, webIpcNo=null, seoTitle=null, seoKeywords=null, seoDescription=null, tenantJournalId=null, journalId=1308397196074385509, journalNameCn=null, journalNameEn=null, grayFlag=null, tenantId=1146029695717560320, platformId=null, journalGroupId=null, journalGroupNameCn=null, journalGroupNameEn=null, type=1, domain=https://castjournals.cast.org.cn/joweb/cdxb/CN, language=CN, createTime=1789883484704, createBy=18614031015, updateTime=1789883745058, updateBy=18614031015, name=草地学报-中文, tplId=1146099689490845704, title=草地学报, delFlag=0, indexPage=/home, props=[WebsiteProps(id=1308430669353340972, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=articleTextType, value=kx, createTime=1789883781040, updateTime=1789883781040, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669328175145, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=banner, value=null, createTime=1789883781034, updateTime=1789883781034, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669382701103, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=grayFlag, value=0, createTime=1789883781047, updateTime=1789883781047, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669319786536, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=logo, value=https://castjournals.cast.org.cn/joweb/cdxb/CN/file/pic?fileId=BZ28lIoKdB54MmA0z6K66g==, createTime=1789883781032, updateTime=1789883781032, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669395284017, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=minRunFlag, value=0, createTime=1789883781050, updateTime=1789883781050, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669344952363, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=picServerUrl, value=https://castjournals.cast.org.cn/joweb/cdxb/CN/file/pic, createTime=1789883781038, updateTime=1789883781038, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669391089712, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=silenceFlag, value=0, createTime=1789883781049, updateTime=1789883781049, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669336563754, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=staticResourcePath, value=https://castjournals.cast.org.cn/joweb/cast_kjdb_cn_619/, createTime=1789883781036, updateTime=1789883781036, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669361729581, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=themeColor, value=null, createTime=1789883781042, updateTime=1789883781042, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430669370118190, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426430071695, code=themeStyle, value=null, createTime=1789883781044, updateTime=1789883781044, creator=18614031015, updator=18614031015)]), Website(id=1308429426501374870, webName=null, webTitle=null, webDomain=null, webCopyrigh=null, webIpcNo=null, seoTitle=null, seoKeywords=null, seoDescription=null, tenantJournalId=null, journalId=1308397196074385509, journalNameCn=null, journalNameEn=null, grayFlag=null, tenantId=1146029695717560320, platformId=null, journalGroupId=null, journalGroupNameCn=null, journalGroupNameEn=null, type=1, domain=https://castjournals.cast.org.cn/joweb/cdxb/EN, language=EN, createTime=1789883484721, createBy=18614031015, updateTime=1789883716139, updateBy=18614031015, name=草地学报-英文, tplId=1146101810881728533, title=Acta Agrestia Sinica, delFlag=0, indexPage=/home, props=[WebsiteProps(id=1308430635979264030, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=articleTextType, value=kx, createTime=1789883773083, updateTime=1789883773083, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635954098203, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=banner, value=null, createTime=1789883773077, updateTime=1789883773077, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430636000235553, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=grayFlag, value=0, createTime=1789883773088, updateTime=1789883773088, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635945709594, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=logo, value=https://castjournals.cast.org.cn/joweb/cdxb/EN/file/pic?fileId=BZ28lIoKdB54MmA0z6K66g==, createTime=1789883773075, updateTime=1789883773075, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430636012818467, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=minRunFlag, value=0, createTime=1789883773091, updateTime=1789883773091, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635970875421, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=picServerUrl, value=https://castjournals.cast.org.cn/joweb/cdxb/EN/file/pic, createTime=1789883773081, updateTime=1789883773081, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430636004429858, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=silenceFlag, value=0, createTime=1789883773089, updateTime=1789883773089, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635962486812, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=staticResourcePath, value=https://castjournals.cast.org.cn/joweb/cast_kjdb_en_623/, createTime=1789883773079, updateTime=1789883773079, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635987652639, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=themeColor, value=null, createTime=1789883773085, updateTime=1789883773085, creator=18614031015, updator=18614031015), WebsiteProps(id=1308430635991846944, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1308429426501374870, code=themeStyle, value=null, createTime=1789883773086, updateTime=1789883773086, creator=18614031015, updator=18614031015)])], journalTitle=草地学报, weixinUrl=null, journalUrl=https://manu40.magtech.com.cn/Jweb_cdxb, iacademicId=null, status=1, seqNo=null, journalTitleEn=Acta Agrestia Sinica, journalPhotoCn=gCdi9sXCX82eLR6S1d4VLg==, journalPhotoEn=4dKqEDfsaGuyf+bpm/3gfw==, journalFirstLetter=C, journalRecommend=null, journalNew=null, journalCollection=null, jcrJf=null, cjcrJf=null, jcrJfStr=null, cjcrJfStr=null, submissionFirstDecision=null, sciSubjectClassification=null, casSubjectClassification=null, citeScore=null, totalCitationFrequency=null, icpCode=null, psCode=null, advertisingLicenseCode=null, copyrightInformation=null, country=null, option=, provinceCode=null, provinceName=null, collectFlag=false, interPubPlatform=, interPubPlatformUrl=null), detailUrlCn=https://castjournals.cast.org.cn/joweb/cdxb/CN/10.11733/j.issn.1007-0435.2026.02.006, detailUrlEn=https://castjournals.cast.org.cn/joweb/cdxb/EN/10.11733/j.issn.1007-0435.2026.02.006, pdfUrlCn=https://castjournals.cast.org.cn/joweb/cdxb/CN/PDF/10.11733/j.issn.1007-0435.2026.02.006, pdfUrlEn=https://castjournals.cast.org.cn/joweb/cdxb/EN/PDF/10.11733/j.issn.1007-0435.2026.02.006, aliStartDate=null, aliEndDate=null, collectionFlag=false, citedCount=null, citedUrl=null, previewStatus=0, delFlag=0, hasFullText=0, orderTime=1771084800000, fullTextJson=null, articleText=null, reference=LIU L Y,FAN X F,TAN P H,et al. The development of SSR markers based on RNA-sequencing and its validation between and within Carex L. species[J]. BMC Plant Biology ,2021,21(1):1-15 LIU L Y,FAN X F,Teng K,et al. Advances in development of genetic diversity of Carex L[J]. Acta Agrestia Sinica ,2021,29(6): 1148-1157 刘凌云,范希峰,滕珂,等. 苔草属植物遗传多样性研究进展[J]. 草地学报,2021,29(6):1148-1157 YUAN X H,WU J Y,TENG W J,et al. Evapotranspiration characteristics of carex leucochlora and comparison with other turfs and groundcovers[J]. Acta Agrestia Sinica ,2018,26(1):40-44 袁小环,武菊英,滕文军,等. 青绿苔草蒸散特性及与其他草坪地被的比较研究[J]. 草地学报,2018, 26(1):40-44 TENG K,TENG W,WEN H,et al. PacBio single-molecule long-read sequencing shed new light on the complexity of the Carex breviculmis transcriptome[J]. BMC Genomics ,2019,20(1):1-15 THURBER C,REAGON M,Gross B,et al. Molecular evolution of shattering loci in U.S. weedy rice[J]. Molecular Ecology ,2010, 19(16):3271-3284 WU W,LIU X,WANG M,et al. A single-nucleotide polymorphism causes smaller grain size and loss of seed shattering during African rice domestication[J]. Nature Plants ,2017,3(6):1-7 LI C,ZHOU A,SANG T,et al. Rice domestication by reducing shattering[J]. Science ,2006,311(5769):1936-1939 ZHOU Y,LU D,LI C,et al. Genetic control of seed shattering in rice by the APETALA2 transcription factor SHATTERING ABORTION1 [J]. The Plant Cell ,2012,24(3):1034-1048 ZHANG Y,ZHOU J,YANG Y,et al. Two SNP mutations turned off seed shattering in rice[J]. Plants ,2019,8(11):475 ZHANG Y,XIA Q,JIANG X,et al. Reducing seed shattering in weedy rice by editing SH4 and qSH1 genes: Implications in Environmental Biosafety and Weed Control through Transgene Mitigation[J]. Biology ,2022,11(12):1823 LILJEGREN S,ROEDE A,KEMPIN S,et al. Control of fruit patterning in Arabidopsis by INDEHISCENT[J]. Cell ,2004,116(6): 843-853 MAGSEN C,BRINCH PEGERSEN H. A novel wheat q’ allele identified by forward genetic in silico TILLING[J]. Journal of Plant Physiology ,2020,251:153221 POURKHEIRANDISH M,HENSEL G,KILIAN B, et al. Evolution of the grain dispersal system in Barley[J]. Cell ,2015,162(3): 527-539 LIN Z,LI X,SHANNON L M,et al. Parallel domestication of the Shattering 1 genes in cereals[J]. Nature Genetics ,2012, 44(6):720-724 MAMIDI S,HEALEY A,HUANG P,et al. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci[J]. Nature Biotechnology ,2020,38(10):1203-1210 ZHAO Y,ZHANG J,ZHANG Z,et al. Elymus nutans genes for seed shattering and candidate gene-derived EST-SSR markers for germplasm evaluation[J]. BMC Plant Biology ,2019,19:1-15 FU Z,SONG J,ZHAO J,et al. Identification and expression of genes associated with the abscission layer controlling seed shattering in Lolium perenne [J]. AOB Plants ,2019,11(1):ply076 CHEN K,WANG Y,ZHANG R,et al. CRISPR/Cas genome editing and precision plant breeding in agriculture[J]. Annual Review of Plant Biology ,2019,70(1):667-697 SHENG X,SUN Z,WANG X,et al. Improvement of the rice “Easy-to-Shatter” trait via CRISPR/Cas9-mediated mutagenesis of the qSH1 gene[J]. Frontiers in Plant Science ,2020,11:619 GROGG D,ROHNER M,YATES S,et al. Callus induction from diverse explants and genotypes enables robust transformation of perennial ryegrass (Lolium perenne L.) [J]. Plants ,2022,11(15):2054 ZHAO H,ZHAO S,CAO Y,et al. Development of a single transcript CRISPR/Cas9 toolkit for efficient genome editing in autotetraploid alfalfa[J]. Crop Journal ,2024,12(3):788-795 NG H,GONDO T,TANAKAH,et al. CRISPR/Cas9-mediated knockout of NYC1 gene enhances chlorophyll retention and reduces tillering in Zoysia matrella (L.) Merrill[J]. Plant Cell Reports ,2024,43(2):50 JIA N,LIU X,GAO H A.DNA2 homolog is required for DNA damage repair, cell cycle regulation, and meristem maintenance in plants[J]. Plant Physiology ,2016,171(1):318-333 SPARKES I,RUNIONS J,KEARNSA, et al. Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants[J]. Nature Protocols , 2006,1(4):2019-2025 CONCORDET J P,HAEUSSLER M. CRISPOR: intuitive guide selection for CRISPR/Cas9 genome editing experiments and screens[J]. Nucleic Acids Research , 2018,46(W1):W242-W245 LUAN X,XU W,ZHANG J,et al. Genome-Scale Identification, Classification, and Expression Profiling of MYB Transcription Factor Genes in Cinnamomum camphora [J]. International Journal of Molecular Sciences ,2022,23(22) :14279 LOCKHART J. Ripe for the picking: finding the gene behind variation in strawberry fruit color[J]. Plant Cell . 2020,32(12):3650-3651 DONG X,LIU X,CHENG, L,et al. SlBEL11 regulates flavonoid biosynthesis, thus fine-tuning auxin efflux to prevent premature fruit drop in tomato[J]. Journal of Integrative Plant Biology ,2024.66(4):749-770 SEO P. Recent advances in plant membrane-bound transcription factor research: Emphasis on intracellular movement[J]. Journal of Integrative Plant Biology , 2014,56(4):334-342 LI J,HAN G,SUN C,et al. Research advances of MYB transcription factors in plant stress resistance and breeding[J]. Plant Signaling & Behavior , 2019,14(8):1613131 LI K,DUAN L,ZHANG Y,et al. Genome-wide identification and expression profile analysis of trihelix transcription factor family genes in response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench] [J]. BMC Genomics ,2021,22(1):1-17 TROFIMOV K,IVANOV R,EUTEBACH M,et al. Mobility and localization of the iron deficiency-induced transcription factor bHLH039 change in the presence of FIT[J]. Plant Direct ,2019,3(12):e00190 MA X,NIAN J,YU H,et al. Linking glucose signaling to nitrogen utilization by the OsHXK7-ARE4 complex in rice[J]. Developmental Cell ,2023,58(16):1489-1501 YAN H,MA L,WANG Z,et al. Multiple tissue-specific expression of rice seed-shattering gene SH4 regulated by its promoter pSH4 [J]. Rice ,2015,8:1-10 WU G,LI Q,TAN Y,et al. Advances in understanding the mechanisms of organ abscission in vivo and in vitro plants[J]. Plant Growth Regulation ,2024,103(2):293-306 CONG L,RAN F,COX D,et al. Multiplex genome engineering using CRISPR/Cas systems[J]. Science , 2013,339(6121):819-823 UNIYAL A,MANSOTRA K,YADAV S,et al. An overview of designing and selection of sgRNAs for precise genome editing by the CRISPR-Cas9 system in plants[J]. 3 Biotech ,2019,9(6):223 DOENCH J,FUSI N,SULLENDER M,et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9[J]. Nature Biotechnology ,2016,34(2):184-191 LIANG Z,CHEN K,LI T,et al. Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes[J]. Nature Communications ,2017,8(1):14261 WANG Z,WANG S,LI D,et al. Optimized paired-sgRNA/Cas9 cloning and expression cassette triggers high-efficiency multiplex genome editing in kiwifruit[J]. Plant Biotechnology Journal ,2018,16(8):1424-1433 YAO J M,HAO H H,ZHANG J, et al. The use of the tRNA-sgRNA/Cas9 system for gene editing in perennial ryegrass protoplasts[J]. Acta Prataculturae Sinica ,2023,32(4):129-141 姚佳明,郝欢欢,张敬,等. tRNA-sgRNA/Cas9 系统介导多年生黑麦草原生质体的基因编辑[J].草业学报,2023,32(4):129-141)
草地学报
|研究论文
2026
, 34
(2) :
437
-446
青绿苔草
CbSH4 基因克隆及基因编辑靶点筛选
全屏
黄扬洁1 , 滕珂2 , 范希峰2 , 岳跃森2 , 张辉2 , 温海峰2 , 尹淑霞1 , 刘凌云2
作者信息
1 北京林业大学草业与草原学院, 北京 100083; 2 北京市农林科学院草业花卉与景观生态研究所, 北京 100097
作者简介:
黄扬洁(2001-),女,汉族,湖南永州人,硕士研究生,主要从事草坪草遗传育种研究,E-mail:Younge0712@163.com
Molecular Cloning and Gene Editing Targets Screening of CbSH4 in Carex breviculmis
HUANG Yang-jie1 , TENG Ke2 , FAN Xi-feng2 , YUE Yue-sen2 , ZHANG Hui2 , WEN Hai-feng2 , YIN Shu-xia1 , LIU Ling-yun2
Affiliations
1 School of Grassland Science, Beijing Forestry University, Beijing 100083, China; 2 Institute of Grassland, Flowers, and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
doi: 10.11733/j.issn.1007-0435.2026.02.006
文章导航
青绿苔草(Carex breviculmis )是一种节水抗旱的重要乡土物种,具有绿期长、耐阴、结实率高等优点。但在实际采收过程中,种子极易落粒的问题限制了种子机械化收获和大规模生产应用。为探究SH4 基因在青绿苔草落粒过程中的功能,进一步利用基因编辑技术创制低落粒新种质,本研究克隆青绿苔草CbSH4 基因并进行基因编辑靶点筛选。结果表明,CbSH4 编码319个氨基酸残基,其编码产物是亲水性蛋白,与康藏嵩草(Carex littledalei )亲缘关系最近。CbSH4 含有1个高度保守的Myb4 DNA结合域,属于典型的MYB转录因子。烟草瞬时表达结果显示,CbSH4 定位于细胞核和细胞质。实时荧光定量结果表明,CbSH4 在穗中的相对表达量显著高于根和叶,在不同发育时期的离区中均有表达。同时,为了在青绿苔草中实现高效的基因编辑,本研究设计了3个特异性靶点,利用sgRNA体外转录和筛选,获得切割效率58.3%的sgRNA1,可用于后续青绿苔草基因编辑。本研究成功克隆了CbSH4 并完成初步功能分析,筛选出了高效基因编辑靶点,为创制低落粒的青绿苔草新种质提供了基础。
青绿苔草
/
SH4 基因
/
亚细胞定位
/
表达分析
/
靶点筛选
/
落粒性
Carex breviculamis is an important native species that is water-saving and drought resistant, with advantages such as long green period, shade tolerance, and high fruiting rate. However, in the actual harvesting process, the problem of seeds easily falling off limits the mechanization of seed harvesting and large-scale production applications. In order to explore the function of SH4 gene in the process of seed-shattering in C. breviculmis and further use gene editing technology to create new germplasm resistant to seed shattering, the CbSH4 gene was cloned and the gene editing target was screened. The CbSH4 encoded 319 amino acid residues, was a hydrophilic protein, and was most closely related to Carex littledalei, containing a highly conserved Myb4 DNA-binding domain, which belonged to a typical MYB transcription factor. The transient expression results of Nicotiana benthamiana showed that CbSH4 protein was localized in the nucleus and cytoplasm. The real-time fluorescence quantification results showed that the relative expression level of CbSH4 in the spike was significantly higher than that in the roots and leaves, and it was expressed in the abscission zone at different developmental stages. At the same time, in order to achieve efficient gene editing in C. breviculmis , three specific targets were designed in this study, and sgRNA1 was obtained by sgRNA transcription and screening in vitro with a cleavage efficiency of 58.3%, which could be used for subsequent gene editing of C. breviculmis . In this study, CbSH4 was successfully cloned and the preliminary functional analysis was completed, and the high-efficiency gene editing targets were screened, which provided a basis for the creation of new germplasm with low seed shattering.
Carex breviculmis
/
SH4 gene
/
Subcellular localization
/
Expression analysis
/
Gene target screening
/
Seed shattering
黄扬洁, 滕珂, 范希峰, 岳跃森, 张辉, 温海峰, 尹淑霞, 刘凌云.
青绿苔草CbSH4 基因克隆及基因编辑靶点筛选.
草地学报,
2026
, 34
(2)
: 437
-446
.
DOI: 10.11733/j.issn.1007-0435.2026.02.006
HUANG Yang-jie, TENG Ke, FAN Xi-feng, YUE Yue-sen, ZHANG Hui, WEN Hai-feng, YIN Shu-xia, LIU Ling-yun.
Molecular Cloning and Gene Editing Targets Screening of CbSH4 in Carex breviculmis [J].
Acta Agrestia Sinica ,
2026
, 34
(2)
: 437
-446
.
DOI: 10.11733/j.issn.1007-0435.2026.02.006
雄安新区科技创新专项 (2022XAGG0100); 北京市农林科学院科技创新专项 (KJCX20250917,KJCX20251208); 国家自然科学基金项目 (U20A2005,32573613)
参考文献
引证文献
LIU L Y,FAN X F,TAN P H,et al. The development of SSR markers based on RNA-sequencing and its validation between and within Carex L. species[J]. BMC Plant Biology ,2021,21(1):1-15 LIU L Y,FAN X F,Teng K,et al. Advances in development of genetic diversity of Carex L[J]. Acta Agrestia Sinica ,2021,29(6): 1148-1157 刘凌云,范希峰,滕珂,等. 苔草属植物遗传多样性研究进展[J]. 草地学报,2021,29(6):1148-1157 YUAN X H,WU J Y,TENG W J,et al. Evapotranspiration characteristics of carex leucochlora and comparison with other turfs and groundcovers[J]. Acta Agrestia Sinica ,2018,26(1):40-44 袁小环,武菊英,滕文军,等. 青绿苔草蒸散特性及与其他草坪地被的比较研究[J]. 草地学报,2018, 26(1):40-44 TENG K,TENG W,WEN H,et al. PacBio single-molecule long-read sequencing shed new light on the complexity of the Carex breviculmis transcriptome[J]. BMC Genomics ,2019,20(1):1-15 THURBER C,REAGON M,Gross B,et al. Molecular evolution of shattering loci in U.S. weedy rice[J]. Molecular Ecology ,2010, 19(16):3271-3284 WU W,LIU X,WANG M,et al. A single-nucleotide polymorphism causes smaller grain size and loss of seed shattering during African rice domestication[J]. Nature Plants ,2017,3(6):1-7 LI C,ZHOU A,SANG T,et al. Rice domestication by reducing shattering[J]. Science ,2006,311(5769):1936-1939 ZHOU Y,LU D,LI C,et al. Genetic control of seed shattering in rice by the APETALA2 transcription factor SHATTERING ABORTION1 [J]. The Plant Cell ,2012,24(3):1034-1048 ZHANG Y,ZHOU J,YANG Y,et al. Two SNP mutations turned off seed shattering in rice[J]. Plants ,2019,8(11):475 ZHANG Y,XIA Q,JIANG X,et al. Reducing seed shattering in weedy rice by editing SH4 and qSH1 genes: Implications in Environmental Biosafety and Weed Control through Transgene Mitigation[J]. Biology ,2022,11(12):1823 LILJEGREN S,ROEDE A,KEMPIN S,et al. Control of fruit patterning in Arabidopsis by INDEHISCENT[J]. Cell ,2004,116(6): 843-853 MAGSEN C,BRINCH PEGERSEN H. A novel wheat q’ allele identified by forward genetic in silico TILLING[J]. Journal of Plant Physiology ,2020,251:153221 POURKHEIRANDISH M,HENSEL G,KILIAN B, et al. Evolution of the grain dispersal system in Barley[J]. Cell ,2015,162(3): 527-539 LIN Z,LI X,SHANNON L M,et al. Parallel domestication of the Shattering 1 genes in cereals[J]. Nature Genetics ,2012, 44(6):720-724 MAMIDI S,HEALEY A,HUANG P,et al. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci[J]. Nature Biotechnology ,2020,38(10):1203-1210 ZHAO Y,ZHANG J,ZHANG Z,et al. Elymus nutans genes for seed shattering and candidate gene-derived EST-SSR markers for germplasm evaluation[J]. BMC Plant Biology ,2019,19:1-15 FU Z,SONG J,ZHAO J,et al. Identification and expression of genes associated with the abscission layer controlling seed shattering in Lolium perenne [J]. AOB Plants ,2019,11(1):ply076 CHEN K,WANG Y,ZHANG R,et al. CRISPR/Cas genome editing and precision plant breeding in agriculture[J]. Annual Review of Plant Biology ,2019,70(1):667-697 SHENG X,SUN Z,WANG X,et al. Improvement of the rice “Easy-to-Shatter” trait via CRISPR/Cas9-mediated mutagenesis of the qSH1 gene[J]. Frontiers in Plant Science ,2020,11:619 GROGG D,ROHNER M,YATES S,et al. Callus induction from diverse explants and genotypes enables robust transformation of perennial ryegrass (Lolium perenne L.) [J]. Plants ,2022,11(15):2054 ZHAO H,ZHAO S,CAO Y,et al. Development of a single transcript CRISPR/Cas9 toolkit for efficient genome editing in autotetraploid alfalfa[J]. Crop Journal ,2024,12(3):788-795 NG H,GONDO T,TANAKAH,et al. CRISPR/Cas9-mediated knockout of NYC1 gene enhances chlorophyll retention and reduces tillering in Zoysia matrella (L.) Merrill[J]. Plant Cell Reports ,2024,43(2):50 JIA N,LIU X,GAO H A.DNA2 homolog is required for DNA damage repair, cell cycle regulation, and meristem maintenance in plants[J]. Plant Physiology ,2016,171(1):318-333 SPARKES I,RUNIONS J,KEARNSA, et al. Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants[J]. Nature Protocols , 2006,1(4):2019-2025 CONCORDET J P,HAEUSSLER M. CRISPOR: intuitive guide selection for CRISPR/Cas9 genome editing experiments and screens[J]. Nucleic Acids Research , 2018,46(W1):W242-W245 LUAN X,XU W,ZHANG J,et al. Genome-Scale Identification, Classification, and Expression Profiling of MYB Transcription Factor Genes in Cinnamomum camphora [J]. International Journal of Molecular Sciences ,2022,23(22) :14279 LOCKHART J. Ripe for the picking: finding the gene behind variation in strawberry fruit color[J]. Plant Cell . 2020,32(12):3650-3651 DONG X,LIU X,CHENG, L,et al. SlBEL11 regulates flavonoid biosynthesis, thus fine-tuning auxin efflux to prevent premature fruit drop in tomato[J]. Journal of Integrative Plant Biology ,2024.66(4):749-770 SEO P. Recent advances in plant membrane-bound transcription factor research: Emphasis on intracellular movement[J]. Journal of Integrative Plant Biology , 2014,56(4):334-342 LI J,HAN G,SUN C,et al. Research advances of MYB transcription factors in plant stress resistance and breeding[J]. Plant Signaling & Behavior , 2019,14(8):1613131 LI K,DUAN L,ZHANG Y,et al. Genome-wide identification and expression profile analysis of trihelix transcription factor family genes in response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench] [J]. BMC Genomics ,2021,22(1):1-17 TROFIMOV K,IVANOV R,EUTEBACH M,et al. Mobility and localization of the iron deficiency-induced transcription factor bHLH039 change in the presence of FIT[J]. Plant Direct ,2019,3(12):e00190 MA X,NIAN J,YU H,et al. Linking glucose signaling to nitrogen utilization by the OsHXK7-ARE4 complex in rice[J]. Developmental Cell ,2023,58(16):1489-1501 YAN H,MA L,WANG Z,et al. Multiple tissue-specific expression of rice seed-shattering gene SH4 regulated by its promoter pSH4 [J]. Rice ,2015,8:1-10 WU G,LI Q,TAN Y,et al. Advances in understanding the mechanisms of organ abscission in vivo and in vitro plants[J]. Plant Growth Regulation ,2024,103(2):293-306 CONG L,RAN F,COX D,et al. Multiplex genome engineering using CRISPR/Cas systems[J]. Science , 2013,339(6121):819-823 UNIYAL A,MANSOTRA K,YADAV S,et al. An overview of designing and selection of sgRNAs for precise genome editing by the CRISPR-Cas9 system in plants[J]. 3 Biotech ,2019,9(6):223 DOENCH J,FUSI N,SULLENDER M,et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9[J]. Nature Biotechnology ,2016,34(2):184-191 LIANG Z,CHEN K,LI T,et al. Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes[J]. Nature Communications ,2017,8(1):14261 WANG Z,WANG S,LI D,et al. Optimized paired-sgRNA/Cas9 cloning and expression cassette triggers high-efficiency multiplex genome editing in kiwifruit[J]. Plant Biotechnology Journal ,2018,16(8):1424-1433 YAO J M,HAO H H,ZHANG J, et al. The use of the tRNA-sgRNA/Cas9 system for gene editing in perennial ryegrass protoplasts[J]. Acta Prataculturae Sinica ,2023,32(4):129-141 姚佳明,郝欢欢,张敬,等. tRNA-sgRNA/Cas9 系统介导多年生黑麦草原生质体的基因编辑[J].草业学报,2023,32(4):129-141
2026年第34卷第2期
PDF下载
73
18
引用本文
BibTeX
文章信息
doi: 10.11733/j.issn.1007-0435.2026.02.006
接收时间:2025-08-12
首发时间:2026-09-23
收稿日期:2025-08-12
修回日期:2025-10-20
https://castjournals.cast.org.cn/joweb/cdxb/CN/10.11733/j.issn.1007-0435.2026.02.006
复制链接
引用本文
BibTeX
2种不同金属材料的力学参数
科 Family 属数 Number of genus 种数 Number of species 占总种数比例 Percentage of total species (%) 属 Genus 种数 Number of species 占总种数比例 Percentage of total species (%) 鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78 小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39 多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39 红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87 小菇属 Mycena 11 5.26 光柄菇属 Pluteus 5 2.39 红菇属 Russula 17 8.13 栓菌属 Trametes 5 2.39
关闭全屏
BibTeX
EndNote
RefWorks
TxT