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2 Yunnan Academy of Forestry and Grassland, Kunming, Yunnan Province 650201, China, correspAuthors=null, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1309569833012913090, articleId=1309569832740283329, tenantId=1146029695717560320, journalId=1308397196074385509, language=CN, title=香辣蓼叶绿体基因组密码子偏好性分析, columnId=1309565024058835950, journalTitle=草地学报, columnName=研究论文, runingTitle=null, highlight=null, articleAbstract=为解析香辣蓼（Persicaria odorata Lour.）叶绿体基因组密码子使用偏好性，本研究采用下一代测序技术对其叶绿体基因组测序。通过对原始数据过滤、组装、注释并构建物理图谱，系统分析52条蛋白质编码序列的密码子使用特征。结果表明：香辣蓼叶绿体基因组全长159 897 bp，呈典型的四分体结构，包含大单拷贝区（Large single-copy region，LSC）、小单拷贝区（Small single-copy region，SSC）以及两个反向重复区（Inverted repeat，IR）。该叶绿体基因组总GC含量为38.88%，其中GC₁>GC₂>GC₃，偏好以A/U结尾。有效密码子数、密码子适应指数、密码子偏好指数、最优密码子使用频率的范围分别为36.29~54.14，0.10~0.30，-0.26~0.19和0.26~0.53，表明整体密码子使用偏好性较弱。中性绘图、ENC-plot和PR2-plot分析显示密码子使用偏好受突变和选择压力共同影响，且选择压力占主导，最终筛选出最优密码子10个。本研究为深入解析香辣蓼叶绿体基因功能、探讨其进化机制及指导分子育种提供了理论依据与标记资源。, authors=宋志姣¹, 李娥¹, 杨萍¹, 李贵祥², 陈文华¹, authorsList=宋志姣, 李娥, 杨萍, 李贵祥, 陈文华, authorCompany=1 保山学院资源环境学院, 云南 保山 678000;
2 云南省林业和草原科学院, 云南 昆明 650201, correspAuthors=null, authorNote=宋志姣（1988-），女，回族，云南保山人，博士，主要从事植物种质资源开发与利用研究，E-mail：janeolo@163.com, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=ye/PbnPHNUp6Zlr+Siedmw==, pdfFileSize=4572460, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=高黎贡山生态功能提升及可持续发展技术研究与示范 (202303AC10001201); 怒江下游山地农业生态系统云南省野外科学观测研究站 (202305AM340031); “兴保英才培养计划”青年人才专项 (2023QNRC001); 云南省科技特派员项目资助)}, authors=[Author(id=1320972887838806470, tenantId=1146029695717560320, journalId=null, articleId=1309569832740283329, orderNo=null, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=null, email=null, emailSecond=null, emailThird=null, 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Persicaria odorata （Lour.） Soják. （Polygonaceae）， a newly naturalized plant in China[J]. Journal of Tropical and Subtropical Botany， 2019， 27（4）：465-468王冰， 金静婉， 陈少风， 等. 香辣蓼， 中国春蓼属（蓼科）一新归化植物[J]. 热带亚热带植物学报， 2019， 27（4）：465-468
ŘEBÍČKOVÁ K， BAJER T， ŠILHA D， et al. Chemical composition and determination of the antibacterial activity of essential oils in liquid and vapor phases extracted from two different Southeast Asian herbs-Houttuynia cordata （Saururaceae） and Persicaria odorata （Polygonaceae） [J]. Molecules， 2020， 25（10）：2432
STARKENMANN C， LUCA L， NICLASS Y， et al. Comparison of volatile constituents of Persicaria odorata （Lour.） soják （Polygonum odoratum （Lour.） and Persicaria hydropiper L. Spach （Polygonum hydropiper L.）[J]. Journal of Agricultural and Food Chemistry， 2006， 54（8）：3067-3071
MAO JIAN. Key Technologies and Engineering Applications of Huangjiu Brewing[M]. Beijing： Chemical Industry Press， 2020：5-20毛健. 黄酒酿造关键技术与工程应用[M]. 北京：化学工业出版社， 2020：5-20
SHAVANDI M， HADDADIAN Z， ISMAIL M R. Eryngium foetidum L. Coriandrum sativum and Persicaria odorata L.： a review[J]. Journal of Asian Scientific Research， 2012， 2（8）：410
ALMARIE A， MAMAT A， WAHAB Z， et al. Chemical composition and phytotoxicity of essential oils isolated from Malaysian plants [J]. Allelopathy Journal， 2016， 37（1）： 55-70
CHANSIW N， PARADEE N， CHOTINANTAKUL K， et al. Anti-hemolytic， antibacterial and anti-cancer activities of methanolic extracts from leaves and stems of Polygonum odoratum[J]. Asian Pacific Journal of Tropical Biomedicine， 2018， 8（12）：580
ABUBAKAR M A， SHARIFF A H M， ZULKIFLI R M， et al. Antibacterial properties of Persicaria minor （Huds.） ethanolic and aqueous-ethanolic leaf extracts[J]. Journal of Applied Pharmaceutical Science， 2015：50-56
ABDUL BASIT M， ABDUL KADIR A， LOH T C， et al. Effects of inclusion of different doses of Persicaria odorata leaf meal （POLM） in broiler chicken feed on biochemical and haematological blood indicators and liver histomorphological changes[J]. Animals， 2020， 10（7）：1209
DING S J， WEI J S， LU Y L， et al. Characteristics and Codon usage bias of Picea brachytyla var. complanata chloroplast genome[J]. Journal of Central South University of Forestry & Technology， 2023， 43（4）：156-163， 190丁淑金， 魏健生， 陆莹玲， 等. 油麦吊云杉叶绿体基因组特征及密码子偏性分析[J]. 中南林业科技大学学报， 2023， 43（4）：156-163， 190
HONG S R， CHEN Y， JIANG X F， et al. Analysis of the complete chloroplast genome sequence characteristics and code usage bias of Sorghum bicolor×Sorghum sudanense hybrid[J]. Pratacultural Science， 2024， 41（12）：2939-2953洪森荣， 陈悦， 蒋晓峰， 等. 高丹草叶绿体基因组特征及密码子偏好性分析[J]. 草业科学， 2024， 41（12）：2939-2953
LIU F X， MOVAHEDI A， YANG W G， et al. The complete chloroplast genome and characteristics analysis of Callistemon rigidus R.Br[J]. Molecular Biology Reports， 2020， 47（7）：5013-5024
XIA X， PENG J Y， WANG D W， et al. Codon usage bias in chloroplast genomes of three Ficus species[J]. Journal of Northwest Forestry University， 2022， 37（5）：88-94夏晞， 彭劲谕， 王大玮， 等. 3种榕属叶绿体基因组密码子偏好性分析[J]. 西北林学院学报， 2022， 37（5）：88-94
DANIELL H， LIN C S， YU M， et al. Chloroplast genomes： diversity， evolution， and applications in genetic engineering[J]. Genome Biology， 2016， 17（1）：134
DU M C， WANG W， BAO H J， et al. Analysis of codon bias in chloroplast genome of Trigonella foenum-graecum[J]. Acta Agrestia Sinica， 2024， 32（2）：409-418杜明川， 王伟， 鲍海娟， 等. 葫芦巴叶绿体基因组密码子偏好性分析[J]. 草地学报， 2024， 32（2）：409-418
YANG H Y， WANG L Q， CHEN H M， et al. Phylogenetic analysis and development of molecular markers for five medicinal Alpinia species based on complete plastome sequences[J]. BMC Plant Biology， 2021， 21（1）：431
YU Z W， CHEN Y， GUO F X， et al. Analysis of Codon usage preference of chloroplast genome of Isatis indigotica[J]. Acta Agrestia Sinica， 2024， 32（8）：2374-2385余志伟， 陈垣， 郭凤霞， 等. 菘蓝叶绿体基因组密码子使用偏好性分析[J]. 草地学报， 2024， 32（8）：2374-2385
ZHAO S， DENG L H， CHEN F. Codon usage bias of chloroplast genome in Kandelia obovata[J]. Journal of Forest and Environment， 2020， 40（5）：534-541赵森， 邓力华， 陈芬. 秋茄叶绿体基因组密码子使用偏好性分析[J]. 森林与环境学报， 2020， 40（5）：534-541
SHEN L W， CHEN S Q， LIANG M， et al. Comparative analysis of Codon usage bias in chloroplast genomes of ten medicinal species of Rutaceae[J]. BMC Plant Biology， 2024， 24（1）：424
YANG Y， LIU X Y， HE L X， et al. Comparative chloroplast genomics and codon usage bias analysis in Hevea Genus[J]. Genes， 2025， 16（2）：201
YANG X M， WANG Y， GONG W X， et al. Comparative analysis of the Codon Usage pattern in the chloroplast genomes of Gnetales species[J]. International Journal of Molecular Sciences， 2024， 25（19）：10622
JIN J J， YU W B， YANG J B， et al. GetOrganelle： a fast and versatile toolkit for accurate de novo assembly of organelle genomes[J]. Genome Biology， 2020， 21（1）：241
SHI L C， CHEN H M， JIANG M， et al. CPGAVAS2， an integrated plastome sequence annotator and analyzer[J]. Nucleic Acids Research， 2019， 47（W1）：W65-W73
LIU S Y， NI Y， LI J L， et al. CPGView： A package for visualizing detailed chloroplast genome structures[J]. Molecular Ecology Resources， 2023， 23（3）：694-704
CAO J J， HUI C M， XIANG Z Q， et al. Condon usage bias in chloroplast genome of Dendrocalamus sinicus[J]. Southwest China Journal of Agricultural Sciences， 2025， 38（4）：673-682曹建杰， 辉朝茂， 向自乾， 等. 巨龙竹叶绿体基因组密码子偏好性分析[J]. 西南农业学报， 2025， 38（4）：673-682
SUEOKA N. Near homogeneity of PR2-bias fingerprints in the human genome and their implications in phylogenetic analyses[J]. Journal of Molecular Evolution， 2001， 53（4）：469-476
SUEOKA N. Intrastrand parity rules of DNA base composition and usage biases of synonymous codons[J]. Journal of Molecular Evolution， 1995， 40（3）：318-325
ROMERO H， ZAVALA A， MUSTO H. Codon usage in Chlamydia trachomatis is the result of strand-specific mutational biases and a complex pattern of selective forces[J]. Nucleic Acids Research， 2000， 28（10）：2084-2090
SUEOKA N. Two aspects of DNA base composition： G+C content and translation-coupled deviation from intra-strand rule of A=T and G=C[J]. Journal of Molecular Evolution， 1999， 49（1）：49-62
ZHAO Z N， SUN H T， SONG Y R， et al. Chloroplast genome characteristics and codon usage bias analysis of Crataegus L[J]. Jiangsu Journal of Agricultural Sciences， 2023， 39（2）：504-517赵振宁， 孙浩田， 宋雨茹， 等. 山楂属植物叶绿体基因组特征与密码子偏好性分析[J]. 江苏农业学报， 2023， 39（2）：504-517
TANG D F， WEI F， KASHIF M H， et al. Analysis of chloroplast differences in leaves of rice isonuclear alloplasmic lines[J]. Protoplasma， 2018， 255（3）：863-871
WILBUR H CAMPBELL G G. Codon usage in higher plants， green algae， and cyanobacteria[J]. Plant Physiology， 1990， 92（1）：1-11
VICARIO S， MORIYAMA E N， POWELL J R. Codon usage in twelve species of Drosophila[J]. BMC Evolutionary Biology， 2007， 7：226
ZHANG Y， WANG Z F， GUO Y N， et al. Complete chloroplast genomes of Leptodermis scabrida complex： comparative genomic analyses and phylogenetic relationships[J]. Gene， 2021， 791：145715)